RBscore (RNA binding score)

     is a web server to predict RNA/DNA binding sites on protein.
  • 1. It was derived on RNA binding proteins, but shows even higher accuracies on DNA binding proteins;
  • 2. It effectively integrates physico-chemical features with evolutionary feature in prediction;
  • 3. It can describe the nucleic acid binding energy funnel on protein surface;
  • 4. When only sequence information is available, it can predict binding sites on protein sequence using a SVM model, also in high accuracy;
  • 5. Large scale assessment of similar programs are available on NBench.

  • Make a prediction
    Prediction of nucleic acid binding probability in proteins: a neighboring residue network based score.
    Miao Z, Westhof E.
    Nucleic Acids Res. 2015 Jun 23;43(11):5340-51. doi: 10.1093/nar/gkv446.